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SparseVector.h
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1// This file is part of Eigen, a lightweight C++ template library
2// for linear algebra.
3//
4// Copyright (C) 2008-2015 Gael Guennebaud <gael.guennebaud@inria.fr>
5//
6// This Source Code Form is subject to the terms of the Mozilla
7// Public License v. 2.0. If a copy of the MPL was not distributed
8// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
9
10#ifndef EIGEN_SPARSEVECTOR_H
11#define EIGEN_SPARSEVECTOR_H
12
13namespace Eigen {
14
28namespace internal {
29template<typename _Scalar, int _Options, typename _StorageIndex>
30struct traits<SparseVector<_Scalar, _Options, _StorageIndex> >
31{
32 typedef _Scalar Scalar;
33 typedef _StorageIndex StorageIndex;
36 enum {
37 IsColVector = (_Options & RowMajorBit) ? 0 : 1,
38
39 RowsAtCompileTime = IsColVector ? Dynamic : 1,
40 ColsAtCompileTime = IsColVector ? 1 : Dynamic,
41 MaxRowsAtCompileTime = RowsAtCompileTime,
42 MaxColsAtCompileTime = ColsAtCompileTime,
43 Flags = _Options | NestByRefBit | LvalueBit | (IsColVector ? 0 : RowMajorBit) | CompressedAccessBit,
44 SupportedAccessPatterns = InnerRandomAccessPattern
45 };
46};
47
48// Sparse-Vector-Assignment kinds:
49enum {
53};
54
55template< typename Dest, typename Src,
56 int AssignmentKind = !bool(Src::IsVectorAtCompileTime) ? SVA_RuntimeSwitch
57 : Src::InnerSizeAtCompileTime==1 ? SVA_Outer
58 : SVA_Inner>
60
61}
62
63template<typename _Scalar, int _Options, typename _StorageIndex>
65 : public SparseCompressedBase<SparseVector<_Scalar, _Options, _StorageIndex> >
66{
68 using Base::convert_index;
69 public:
73
74 typedef internal::CompressedStorage<Scalar,StorageIndex> Storage;
76
77 enum {
78 Options = _Options
79 };
80
81 EIGEN_STRONG_INLINE Index rows() const { return IsColVector ? m_size : 1; }
82 EIGEN_STRONG_INLINE Index cols() const { return IsColVector ? 1 : m_size; }
83 EIGEN_STRONG_INLINE Index innerSize() const { return m_size; }
84 EIGEN_STRONG_INLINE Index outerSize() const { return 1; }
85
86 EIGEN_STRONG_INLINE const Scalar* valuePtr() const { return m_data.valuePtr(); }
87 EIGEN_STRONG_INLINE Scalar* valuePtr() { return m_data.valuePtr(); }
88
89 EIGEN_STRONG_INLINE const StorageIndex* innerIndexPtr() const { return m_data.indexPtr(); }
90 EIGEN_STRONG_INLINE StorageIndex* innerIndexPtr() { return m_data.indexPtr(); }
91
92 inline const StorageIndex* outerIndexPtr() const { return 0; }
93 inline StorageIndex* outerIndexPtr() { return 0; }
94 inline const StorageIndex* innerNonZeroPtr() const { return 0; }
95 inline StorageIndex* innerNonZeroPtr() { return 0; }
96
98 inline Storage& data() { return m_data; }
100 inline const Storage& data() const { return m_data; }
101
102 inline Scalar coeff(Index row, Index col) const
103 {
104 eigen_assert(IsColVector ? (col==0 && row>=0 && row<m_size) : (row==0 && col>=0 && col<m_size));
105 return coeff(IsColVector ? row : col);
106 }
107 inline Scalar coeff(Index i) const
108 {
109 eigen_assert(i>=0 && i<m_size);
110 return m_data.at(StorageIndex(i));
111 }
112
114 {
115 eigen_assert(IsColVector ? (col==0 && row>=0 && row<m_size) : (row==0 && col>=0 && col<m_size));
116 return coeffRef(IsColVector ? row : col);
117 }
118
126 {
127 eigen_assert(i>=0 && i<m_size);
128
129 return m_data.atWithInsertion(StorageIndex(i));
130 }
131
132 public:
133
136
137 inline void setZero() { m_data.clear(); }
138
140 inline Index nonZeros() const { return m_data.size(); }
141
142 inline void startVec(Index outer)
143 {
145 eigen_assert(outer==0);
146 }
147
149 {
151 eigen_assert(outer==0);
152 return insertBack(inner);
153 }
155 {
156 m_data.append(0, i);
157 return m_data.value(m_data.size()-1);
158 }
159
161 {
163 eigen_assert(outer==0);
164 return insertBackUnordered(inner);
165 }
167 {
168 m_data.append(0, i);
169 return m_data.value(m_data.size()-1);
170 }
171
173 {
174 eigen_assert(IsColVector ? (col==0 && row>=0 && row<m_size) : (row==0 && col>=0 && col<m_size));
175
176 Index inner = IsColVector ? row : col;
177 Index outer = IsColVector ? col : row;
179 eigen_assert(outer==0);
180 return insert(inner);
181 }
183 {
184 eigen_assert(i>=0 && i<m_size);
185
186 Index startId = 0;
187 Index p = Index(m_data.size()) - 1;
188 // TODO smart realloc
189 m_data.resize(p+2,1);
190
191 while ( (p >= startId) && (m_data.index(p) > i) )
192 {
193 m_data.index(p+1) = m_data.index(p);
194 m_data.value(p+1) = m_data.value(p);
195 --p;
196 }
197 m_data.index(p+1) = convert_index(i);
198 m_data.value(p+1) = 0;
199 return m_data.value(p+1);
200 }
201
204 inline void reserve(Index reserveSize) { m_data.reserve(reserveSize); }
205
206
207 inline void finalize() {}
208
210 void prune(const Scalar& reference, const RealScalar& epsilon = NumTraits<RealScalar>::dummy_precision())
211 {
212 m_data.prune(reference,epsilon);
213 }
214
224 {
225 eigen_assert((IsColVector ? cols : rows)==1 && "Outer dimension must equal 1");
226 resize(IsColVector ? rows : cols);
227 }
228
233 void resize(Index newSize)
234 {
235 m_size = newSize;
236 m_data.clear();
237 }
238
247 {
248 if (newSize < m_size)
249 {
250 Index i = 0;
251 while (i<m_data.size() && m_data.index(i)<newSize) ++i;
252 m_data.resize(i);
253 }
254 m_size = newSize;
255 }
256
257 void resizeNonZeros(Index size) { m_data.resize(size); }
258
259 inline SparseVector() : m_size(0) { check_template_parameters(); resize(0); }
260
261 explicit inline SparseVector(Index size) : m_size(0) { check_template_parameters(); resize(size); }
262
263 inline SparseVector(Index rows, Index cols) : m_size(0) { check_template_parameters(); resize(rows,cols); }
264
265 template<typename OtherDerived>
267 : m_size(0)
268 {
269 #ifdef EIGEN_SPARSE_CREATE_TEMPORARY_PLUGIN
271 #endif
272 check_template_parameters();
273 *this = other.derived();
274 }
275
276 inline SparseVector(const SparseVector& other)
277 : Base(other), m_size(0)
278 {
279 check_template_parameters();
280 *this = other.derived();
281 }
282
287 inline void swap(SparseVector& other)
288 {
289 std::swap(m_size, other.m_size);
290 m_data.swap(other.m_data);
291 }
292
293 template<int OtherOptions>
295 {
296 eigen_assert(other.outerSize()==1);
297 std::swap(m_size, other.m_innerSize);
298 m_data.swap(other.m_data);
299 }
300
301 inline SparseVector& operator=(const SparseVector& other)
302 {
303 if (other.isRValue())
304 {
305 swap(other.const_cast_derived());
306 }
307 else
308 {
309 resize(other.size());
310 m_data = other.m_data;
311 }
312 return *this;
313 }
314
315 template<typename OtherDerived>
317 {
318 SparseVector tmp(other.size());
320 this->swap(tmp);
321 return *this;
322 }
323
324 #ifndef EIGEN_PARSED_BY_DOXYGEN
325 template<typename Lhs, typename Rhs>
327 {
328 return Base::operator=(product);
329 }
330 #endif
331
332 friend std::ostream & operator << (std::ostream & s, const SparseVector& m)
333 {
334 for (Index i=0; i<m.nonZeros(); ++i)
335 s << "(" << m.m_data.value(i) << "," << m.m_data.index(i) << ") ";
336 s << std::endl;
337 return s;
338 }
339
341 inline ~SparseVector() {}
342
344 Scalar sum() const;
345
346 public:
347
350 {
351 setZero();
352 m_data.reserve(reserve);
353 }
354
357 {
358 eigen_assert(r==0 || c==0);
359 return fill(IsColVector ? r : c);
360 }
361
364 {
365 m_data.append(0, i);
366 return m_data.value(m_data.size()-1);
367 }
368
371 {
372 eigen_assert(r==0 || c==0);
373 return fillrand(IsColVector ? r : c);
374 }
375
378 {
379 return insert(i);
380 }
381
384
385 // These two functions were here in the 3.1 release, so let's keep them in case some code rely on them.
387 EIGEN_DEPRECATED Storage& _data() { return m_data; }
389 EIGEN_DEPRECATED const Storage& _data() const { return m_data; }
390
391# ifdef EIGEN_SPARSEVECTOR_PLUGIN
392# include EIGEN_SPARSEVECTOR_PLUGIN
393# endif
394
395protected:
396
398 {
399 EIGEN_STATIC_ASSERT(NumTraits<StorageIndex>::IsSigned,THE_INDEX_TYPE_MUST_BE_A_SIGNED_TYPE);
400 EIGEN_STATIC_ASSERT((_Options&(ColMajor|RowMajor))==Options,INVALID_MATRIX_TEMPLATE_PARAMETERS);
401 }
402
405};
406
407namespace internal {
408
409template<typename _Scalar, int _Options, typename _Index>
410struct evaluator<SparseVector<_Scalar,_Options,_Index> >
411 : evaluator_base<SparseVector<_Scalar,_Options,_Index> >
412{
415 typedef typename SparseVectorType::InnerIterator InnerIterator;
416 typedef typename SparseVectorType::ReverseInnerIterator ReverseInnerIterator;
417
418 enum {
420 Flags = SparseVectorType::Flags
421 };
422
424
425 explicit evaluator(const SparseVectorType &mat) : m_matrix(&mat)
426 {
427 EIGEN_INTERNAL_CHECK_COST_VALUE(CoeffReadCost);
428 }
429
430 inline Index nonZerosEstimate() const {
431 return m_matrix->nonZeros();
432 }
433
434 operator SparseVectorType&() { return m_matrix->const_cast_derived(); }
435 operator const SparseVectorType&() const { return *m_matrix; }
436
438};
439
440template< typename Dest, typename Src>
442 static void run(Dest& dst, const Src& src) {
443 eigen_internal_assert(src.innerSize()==src.size());
444 typedef internal::evaluator<Src> SrcEvaluatorType;
445 SrcEvaluatorType srcEval(src);
446 for(typename SrcEvaluatorType::InnerIterator it(srcEval, 0); it; ++it)
447 dst.insert(it.index()) = it.value();
448 }
449};
450
451template< typename Dest, typename Src>
453 static void run(Dest& dst, const Src& src) {
454 eigen_internal_assert(src.outerSize()==src.size());
455 typedef internal::evaluator<Src> SrcEvaluatorType;
456 SrcEvaluatorType srcEval(src);
457 for(Index i=0; i<src.size(); ++i)
458 {
459 typename SrcEvaluatorType::InnerIterator it(srcEval, i);
460 if(it)
461 dst.insert(i) = it.value();
462 }
463 }
464};
465
466template< typename Dest, typename Src>
473
474}
475
476} // end namespace Eigen
477
478#endif // EIGEN_SPARSEVECTOR_H
Matrix3f m
Definition AngleAxis_mimic_euler.cpp:1
int i
Definition BiCGSTAB_step_by_step.cpp:9
#define EIGEN_DEPRECATED
Definition Macros.h:1058
#define eigen_internal_assert(x)
Definition Macros.h:1043
#define EIGEN_UNUSED_VARIABLE(var)
Definition Macros.h:1076
#define EIGEN_ONLY_USED_FOR_DEBUG(x)
Definition Macros.h:1049
#define eigen_assert(x)
Definition Macros.h:1037
#define EIGEN_STRONG_INLINE
Definition Macros.h:917
m col(1)
m row(1)
v resize(3)
v setZero(3)
A insert(1, 2)=0
#define EIGEN_SPARSE_PUBLIC_INTERFACE(Derived)
Definition SparseUtil.h:43
#define EIGEN_SPARSE_INHERIT_ASSIGNMENT_OPERATOR(Derived, Op)
Definition SparseUtil.h:21
#define EIGEN_INTERNAL_CHECK_COST_VALUE(C)
Definition StaticAssert.h:218
#define EIGEN_STATIC_ASSERT(CONDITION, MSG)
Definition StaticAssert.h:127
MatrixXf mat
Definition Tutorial_AdvancedInitialization_CommaTemporary.cpp:1
float * p
Definition Tutorial_Map_using.cpp:9
int rows
Definition Tutorial_commainit_02.cpp:1
int cols
Definition Tutorial_commainit_02.cpp:1
ostream & operator<<(ostream &s, const size_triple_t &t)
Definition analyze-blocking-sizes.cpp:61
Scalar Scalar * c
Definition benchVecAdd.cpp:17
Scalar Scalar int size
Definition benchVecAdd.cpp:17
SCALAR Scalar
Definition bench_gemm.cpp:46
Definition SparseCompressedBase.h:159
Definition SparseCompressedBase.h:245
Common base class for sparse [compressed]-{row|column}-storage format.
Definition SparseCompressedBase.h:38
Base class of any sparse matrices or sparse expressions.
Definition SparseMatrixBase.h:28
internal::traits< Derived >::StorageIndex StorageIndex
Definition SparseMatrixBase.h:43
const Derived & derived() const
Definition SparseMatrixBase.h:143
Index size() const
Definition SparseMatrixBase.h:181
bool isRValue() const
Definition SparseMatrixBase.h:194
internal::traits< Derived >::Scalar Scalar
Definition SparseMatrixBase.h:31
Derived & const_cast_derived() const
Definition SparseMatrixBase.h:145
NumTraits< Scalar >::Real RealScalar
Definition SparseMatrixBase.h:128
A versatible sparse matrix representation.
Definition SparseMatrix.h:98
Index outerSize() const
Definition SparseMatrix.h:145
Storage m_data
Definition SparseMatrix.h:133
Index m_innerSize
Definition SparseMatrix.h:130
Definition SparseUtil.h:61
a sparse vector class
Definition SparseVector.h:66
SparseVector(Index size)
Definition SparseVector.h:261
Base::ReverseInnerIterator ReverseInnerIterator
Definition SparseVector.h:135
EIGEN_DEPRECATED void startFill(Index reserve)
Definition SparseVector.h:349
void resize(Index newSize)
Definition SparseVector.h:233
EIGEN_DEPRECATED Scalar & fill(Index r, Index c)
Definition SparseVector.h:356
EIGEN_DEPRECATED void endFill()
Definition SparseVector.h:383
EIGEN_DEPRECATED Scalar & fillrand(Index r, Index c)
Definition SparseVector.h:370
void startVec(Index outer)
Definition SparseVector.h:142
void resize(Index rows, Index cols)
Definition SparseVector.h:223
Scalar & coeffRef(Index row, Index col)
Definition SparseVector.h:113
Scalar & insertBackByOuterInnerUnordered(Index outer, Index inner)
Definition SparseVector.h:160
EIGEN_DEPRECATED Scalar & fill(Index i)
Definition SparseVector.h:363
StorageIndex * innerNonZeroPtr()
Definition SparseVector.h:95
Scalar coeff(Index i) const
Definition SparseVector.h:107
void swap(SparseMatrix< Scalar, OtherOptions, StorageIndex > &other)
Definition SparseVector.h:294
EIGEN_DEPRECATED const Storage & _data() const
Definition SparseVector.h:389
EIGEN_STRONG_INLINE Index outerSize() const
Definition SparseVector.h:84
void reserve(Index reserveSize)
Definition SparseVector.h:204
Scalar & coeffRef(Index i)
Definition SparseVector.h:125
Scalar & insert(Index i)
Definition SparseVector.h:182
SparseVector & operator=(const SparseVector &other)
Definition SparseVector.h:301
SparseVector & operator=(const SparseSparseProduct< Lhs, Rhs > &product)
Definition SparseVector.h:326
EIGEN_STRONG_INLINE const StorageIndex * innerIndexPtr() const
Definition SparseVector.h:89
EIGEN_STRONG_INLINE Index cols() const
Definition SparseVector.h:82
Scalar & insertBackByOuterInner(Index outer, Index inner)
Definition SparseVector.h:148
SparseVector & operator=(const SparseMatrixBase< OtherDerived > &other)
Definition SparseVector.h:316
void finalize()
Definition SparseVector.h:207
Base::InnerIterator InnerIterator
Definition SparseVector.h:134
SparseVector(const SparseMatrixBase< OtherDerived > &other)
Definition SparseVector.h:266
EIGEN_STRONG_INLINE Index innerSize() const
Definition SparseVector.h:83
void swap(SparseVector &other)
Definition SparseVector.h:287
Storage m_data
Definition SparseVector.h:403
Scalar coeff(Index row, Index col) const
Definition SparseVector.h:102
SparseVector(Index rows, Index cols)
Definition SparseVector.h:263
void conservativeResize(Index newSize)
Definition SparseVector.h:246
void resizeNonZeros(Index size)
Definition SparseVector.h:257
SparseVector()
Definition SparseVector.h:259
const Storage & data() const
Definition SparseVector.h:100
void setZero()
Definition SparseVector.h:137
static void check_template_parameters()
Definition SparseVector.h:397
const StorageIndex * outerIndexPtr() const
Definition SparseVector.h:92
Scalar & insertBack(Index i)
Definition SparseVector.h:154
Storage & data()
Definition SparseVector.h:98
EIGEN_STRONG_INLINE Index rows() const
Definition SparseVector.h:81
StorageIndex * outerIndexPtr()
Definition SparseVector.h:93
EIGEN_STRONG_INLINE Scalar * valuePtr()
Definition SparseVector.h:87
~SparseVector()
Definition SparseVector.h:341
Scalar & insertBackUnordered(Index i)
Definition SparseVector.h:166
EIGEN_DEPRECATED Storage & _data()
Definition SparseVector.h:387
EIGEN_STRONG_INLINE StorageIndex * innerIndexPtr()
Definition SparseVector.h:90
Index nonZeros() const
Definition SparseVector.h:140
const StorageIndex * innerNonZeroPtr() const
Definition SparseVector.h:94
void prune(const Scalar &reference, const RealScalar &epsilon=NumTraits< RealScalar >::dummy_precision())
Definition SparseVector.h:210
EIGEN_STRONG_INLINE const Scalar * valuePtr() const
Definition SparseVector.h:86
SparseVector(const SparseVector &other)
Definition SparseVector.h:276
EIGEN_DEPRECATED Scalar & fillrand(Index i)
Definition SparseVector.h:377
Index m_size
Definition SparseVector.h:404
Scalar & insert(Index row, Index col)
Definition SparseVector.h:172
@ ColMajor
Definition Constants.h:319
@ RowMajor
Definition Constants.h:321
const unsigned int LvalueBit
Definition Constants.h:144
const unsigned int RowMajorBit
Definition Constants.h:66
const unsigned int CompressedAccessBit
Definition Constants.h:191
RealScalar s
Definition level1_cplx_impl.h:126
int EIGEN_BLAS_FUNC() swap(int *n, RealScalar *px, int *incx, RealScalar *py, int *incy)
Definition level1_impl.h:130
@ SVA_Inner
Definition SparseVector.h:51
@ SVA_Outer
Definition SparseVector.h:52
@ SVA_RuntimeSwitch
Definition SparseVector.h:50
Namespace containing all symbols from the Eigen library.
Definition bench_norm.cpp:85
const unsigned int NestByRefBit
Definition Constants.h:169
EIGEN_DEFAULT_DENSE_INDEX_TYPE Index
The Index type as used for the API.
Definition Meta.h:74
const int InnerRandomAccessPattern
Definition SparseUtil.h:48
const int Dynamic
Definition Constants.h:22
Definition BandTriangularSolver.h:13
void product(const MatrixType &m)
Definition product.h:20
Definition Constants.h:522
Holds information about the various numeric (i.e. scalar) types allowed by Eigen.
Definition NumTraits.h:233
Definition Constants.h:510
const SparseVectorType * m_matrix
Definition SparseVector.h:437
evaluator_base< SparseVectorType > Base
Definition SparseVector.h:414
evaluator(const SparseVectorType &mat)
Definition SparseVector.h:425
SparseVectorType::InnerIterator InnerIterator
Definition SparseVector.h:415
SparseVector< _Scalar, _Options, _Index > SparseVectorType
Definition SparseVector.h:413
SparseVectorType::ReverseInnerIterator ReverseInnerIterator
Definition SparseVector.h:416
Definition CoreEvaluators.h:111
Definition CoreEvaluators.h:91
static void run(Dest &dst, const Src &src)
Definition SparseVector.h:442
static void run(Dest &dst, const Src &src)
Definition SparseVector.h:453
static void run(Dest &dst, const Src &src)
Definition SparseVector.h:468
Definition ForwardDeclarations.h:17
#define EIGEN_SPARSE_CREATE_TEMPORARY_PLUGIN
Definition sparse_product.cpp:23